Computational analysis of the sequence-structure relation in SARS-CoV-2 spike protein using protein contact networks | Scientific Reports
Comparison of methods for searching protein sequence databases - Pearson - 1995 - Protein Science - Wiley Online Library
Substitution model - Wikipedia
Shrea Tyagi , Nayna Nambiar , B.J. Reddig , P. Litt , D. Jaroni and E.L. Blewett 1. Union High School, Tulsa, OK 2. Holland Hall
The rapid generation of mutation data matrices from protein sequences | Semantic Scholar
Genes | Free Full-Text | Analysis of Protein Sequence Identity, Binding Sites, and 3D Structures Identifies Eight Pollen Species and Ten Fruit Species with High Risk of Cross-Reactive Allergies
CopulaNet: Learning residue co-evolution directly from multiple sequence alignment for protein structure prediction | Nature Communications
rapid generation of mutation data matrices from protein sequences | Bioinformatics | Oxford Academic
IJMS | Free Full-Text | Proteome-Wide Structural Computations Provide Insights into Empirical Amino Acid Substitution Matrices
Evolutionary velocity with protein language models predicts evolutionary dynamics of diverse proteins - ScienceDirect
Correlation of Conservation of Sequence and Structures of Mycobacterial Hemerythrin-like Proteins with Evolutionary Relationship and Host Pathogenicity | ACS Omega
Biomolecules | Free Full-Text | Developments in Algorithms for Sequence Alignment: A Review
Estimates of evolutionary divergence between SCD protein sequences.... | Download Scientific Diagram
Identifying Deletion Mutation Using Matrix | Semantic Scholar
The rapid generation of mutation data matrices from protein sequences | Semantic Scholar
PepSeA: Peptide Sequence Alignment and Visualization Tools to Enable Lead Optimization | Journal of Chemical Information and Modeling
Novel machine learning approaches revolutionize protein knowledge: Trends in Biochemical Sciences
![Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolution [PeerJ]](https://dfzljdn9uc3pi.cloudfront.net/2018/5549/1/fig-1-2x.jpg "Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolution [PeerJ]")
Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolution [PeerJ]
The rapid generation of mutation data matrices from protein sequences | Semantic Scholar
Characterization of a cetacean aromatase (CYP19) and the phylogeny and functional conservation of vertebrate aromatase
Genes | Free Full-Text | 40 Years of RAS—A Historic Overview
Frontiers | Tracing Evolution Through Protein Structures: Nature Captured in a Few Thousand Folds
Tracking the amino acid changes of spike proteins across diverse host species of severe acute respiratory syndrome coronavirus 2 - ScienceDirect
Frontiers | Innovative in Silico Approaches for Characterization of Genes and Proteins
Protein sequence design with a learned potential | Nature Communications
Frontiers | Mutations of the SARS-CoV-2 Spike Glycoprotein Detected in Cats and Their Effect on Its Structure and Function
Climbing Up and Down Binding Landscapes through Deep Mutational Scanning of Three Homologous Protein–Protein Complexes | Journal of the American Chemical Society
